About the course

Course offered by Prof. Nassir Navab
Team:  Tianyu Song, Shervin Dehghani and Felix Tristram (Contact the course tutors)
Type: Praktikum (IN2106, IN4136)
SWS: 6
ECTS: 10 Credits

Table of contents

Announcements

Registration: Registration through the TUM Matching System is open between 13.09. and 17.09.2024. Results of the matching system will be announced on 24.09.2024. More information you can find on Matching Docs.

Schedule

For lecture sessions, presentation sessions and changes in the schedule, please also refer to TUMOnline.

DateTimePlaceTopicConducted byMaterials
Friday, 28.09.202423:59 CESTEmailDe-registration Deadline

Tuesday, 15.10.202414:00 - 16:00

03.13.010

Lecture 1: Introduction and Project AnnouncementCourse tutors


Tuesday, 22.10.202414:00 - 16:0003.13.010Lecture 2 - Presentation Tips and Project ManagementCourse tutors
Wednesday, 23.10.202423:59 CESTTUM MoodleDeadline to submit project preferencesSeminar Participants


Tuesday, 05.11.202414:00 - 16:0003.13.010Requirements PresentationSeminar Participants
Wednesday, 13.11.202414:00 - 16:0003.13.010Guest Lecture: Software DesignAndreas Strack
Tuesday, 10.12.202414:00 - 16:0003.13.010Intermediate PresentationsSeminar Participants
Wednesday, 11.12.202414:00 - 16:0003.13.010Intermediate PresentationsSeminar Participants
Tuesday, 04.02.202414:00 - 16:0003.13.010Final PresentationsSeminar Participants
Wednesday, 05.02.202414:00 - 16:0003.13.010Final PresentationsSeminar Participants


Available Projects

Projects will be announced in due time and presented during the Introductory meeting. Please communicate a selection of 3 choices, each with an explanation (ca. 5 sentences) for why you want to work on this project and how you meet the requirements specified in the project proposal. Use the Student Application Template provided in the Download section.

01Development of a tool for bone mineral density evaluation based on deep learning of lumbar spine X-rayLiu Zhy (Hongkong) 
02Using Object Detection Models to Detect Lesions in Breast Ultrasound VideosZhikai Yang (KTH Stockholm)
03Deep Learning-based Digital Breast Cancer DiagnosisZhikai Yang (KTH Stockholm)
04Anatomical Measurements-Based Generative ModelMiroslav Březík, Diogo Almeida
05Leveraging LLMs and RAG for Medical Report ParsingAndré Mourato, Miroslav Březík
06Automatic Coronary Artery Tree Labeling and Stenosis AnalysisMiroslav Březík, Diogo Almeida
07Immersive Surgical Procedure Replay in VRTianyu Song, Alexander Winkler
08Automatic pipeline generation for the integration of biomechanical simulation and eXtended Reality applications

Sasan Matinfar, Veronica Ruozzi


09Development of a Data Analysis Tool for Mentalab ExG DeviceDr. Sebastian Herberger
10Towards homogeneous mammography imagingMickael Tardy
11Reducing noise of digital breast tomosynthesisMickael Tardy
12

Organ identification in ultrasound images

Mickael Tardy
13Integration of Ultra-NeRF with ImFusion for 3D Ultrasound Slicing and TrainingMohammad Farid Azampour
14Real-Time Nerve Segmentation and 3D Visualization SystemYordanka Velikova
15Calibration of Heterogeneous Multi-View Camera Systems for Illumination-Robust 3D Reconstruction in Operating RoomsTony Wang & Lennart Bastian

Students

Here you will find the matching results.

In total we assigned 7 first choices, 4 second choices and 2 third choices. Everyone got at least one of their preferences. 

StudentIDName

ProjectID

01Ahmed, Taha10
02Arslan, Ömer12
03Bamel, Parag5
04Efraij, Zaid2
05Hopf, Vivienpre-assigned
06Isler, Onurcan14
07Kauermann, Joseph8
08Kocaman, Kadir13
09Lazuardi, Rachmadio Noval4
10Li, Ruochenpre-assigned
11Liu, Zhenlin6



13Naguib, Mark Maged Michael3
14Pehlivan, Beliz7
15Semenova, Ekaterina9
16Hernandez Fernandez, Francisco Javier15
17Jan-Michael van der Linde11

Prerequisites and Registration

This course requires basic knowledge of C++ or similar OO programming language. The concepts of OO programming and other concepts as conducted in the Introduction to Computer Science lecture are assumed.Registration through the TUM Matching System is mandatory. Your chances to be assigned to the course increase if you give the course a higher rank in your choices. If you already have a potential project, notify the course tutors via e-mail as soon as possible. This increases your chances to be assigned to the course, but you have to register through the matching system in any case. For further details about how the matching system works and its schedule please check the documentation.

Project Proposals

In this lab course, students work on clinical software projects and find solutions for problems in the field of medical applications. The student's workload should be around 10-14 hours per week for a period of 3 - 4 months on the assigned project (10 ECTS course).

Each project is expected to have one contact person (supervisor) who should be available for regular updates or if the student needs any help. In addition, the supervisors are kindly invited to participate in the student presentations (Requirements, Intermediate, Final) taking place at the CAMP chair. Each project supervisor will decide on 50% of the grade based on the student’s performance in the project. The other 50% will be decided upon by lecturers, based on the quality of project management and presentation skills of the student.The project proposal should give a short introduction into the context and describe the most important aspects and expected outcome of the project. Furthermore it should clearly state the required (and optional) skills (programming language, experience with certain libraries etc.).

If you have a suitable project, preferably with a clinical or industrial partner, you are kindly invited to fill out the project proposal template and send it to the course tutors. The deadline for proposal submission is beginning of the lecture period for the Winter Semester 2024/25.

Downloads

* TUM Informatics Student Code of Conduct

* TUM Citation Guide

* CAMP presentation slides for PowerPoint:  CAMPmaster.ppt

* CAMP presentation slides for Latex

* Student project application template

* Supervisor project proposal template

Literature and Resources

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